In Xinzhu-Fang/shinyNDTr: A web-based interface for neural decoding in R

knitr::opts_chunk$set(echo = TRUE)

binned_file_name <-'/student/15/xf15/GitHub/shinyNDTr/data/binned/ZD_150_samples_binned_every_20_samples_start_-301_end_299.Rda'


variable_to_decode <-'combined_ID_position'


num_cv_splits <- 2


ds <- NDTr::basic_DS$new(binned_file_name, variable_to_decode, num_cv_splits)


ds$num_repeats_per_level_per_cv_split <- 2


cl <- NDTr::max_correlation_CL$new()


fps <- list()


cv <- NDTr::standard_CV$new(ds, cl, fps)


DECODING_RESULTS <- cv$run_decoding()


save('DECODING_RESULTS', file = '/student/15/xf15/GitHub/shinyNDTr/results/pdf.rda')

Xinzhu-Fang/shinyNDTr documentation built on Oct. 11, 2020, 9:03 p.m.