SIMLR_Feature_Ranking: SIMLR Feature Ranking
In YTLogos/SIMLR: SIMLR: Single-cell Interpretation via Multi-kernel LeaRning
Description
Usage
Arguments
Value
Examples
Description
perform the SIMLR feature ranking algorithm. This takes as input the original
input data and the corresponding similarity matrix computed by SIMLR
Usage
1
SIMLR_Feature_Ranking(A, X)
Arguments
A
an (n x n) similarity matrix by SIMLR
X
an (m x n) data matrix of gene expression measurements of individual cells
Value
a list of 2 elements: pvalues and ranking ordering over the n covariates
as estimated by the method
Examples
1
SIMLR_Feature_Ranking(A = BuettnerFlorian$results$S, X = BuettnerFlorian$in_X)
YTLogos/SIMLR documentation built on May 9, 2019, 11:06 p.m.
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Description Usage Arguments Value Examples
Description
perform the SIMLR feature ranking algorithm. This takes as input the original input data and the corresponding similarity matrix computed by SIMLR
Usage
1 | SIMLR_Feature_Ranking(A, X)
|
Arguments
A |
an (n x n) similarity matrix by SIMLR |
X |
an (m x n) data matrix of gene expression measurements of individual cells |
Value
a list of 2 elements: pvalues and ranking ordering over the n covariates as estimated by the method
Examples
1 | SIMLR_Feature_Ranking(A = BuettnerFlorian$results$S, X = BuettnerFlorian$in_X)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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