Man pages for YTLogos/ensembldb
Utilities to create and use Ensembl-based annotation databases
| Deprecated | Deprecated functionality |
| EnsDb | Connect to an EnsDb object |
| EnsDb-AnnotationDbi | Integration into the AnnotationDbi framework |
| EnsDb-class | Basic usage of an Ensembl based annotation database |
| EnsDb-exonsBy | Retrieve annotation data from an Ensembl based package |
| EnsDb-lengths | Calculating lengths of features |
| EnsDb-seqlevels | Support for other than Ensembl seqlevel style |
| EnsDb-sequences | Functionality related to DNA/RNA sequences |
| EnsDb-utils | Utility functions |
| Filter-classes | Filters supported by ensembldb |
| global-filters | Globally add filters to an EnsDb database |
| hasProteinData-EnsDb-method | Determine whether protein data is available in the database |
| listEnsDbs | List EnsDb databases in a MySQL server |
| makeEnsemblDbPackage | Generating a Ensembl annotation package from Ensembl |
| ProteinFunctionality | Protein related functionality |
| runEnsDbApp | Search annotations interactively |
| useMySQL-EnsDb-method | Use a MySQL backend |
