predict_XPASS: Construct PRS from the XPASS output.
In YangLabHKUST/XPASS: The XPASS package for corss-population trait prediction using GWAS summary statistics
View source: R/predict_XPASS.R
predict_XPASS R Documentation
Construct PRS from the XPASS output.
Description
This function use the XPASS posterior means to construct PRS for the prediction samples.
Usage
predict_XPASS(pm, file_predgeno)
Arguments
pm
The output 'mu' obtained from the 'XPASS' function, which stores the posterior means computed by XPASS.
file_predgeno
Prefix of the prediction samples' genotypes in plink format.
Value
A data frame storing the PRS generated by using mu1, mu2, mu_XPASS1, and mu_XPASS2, respectively.
Examples
See vignette.
YangLabHKUST/XPASS documentation built on June 29, 2024, 11:16 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
View source: R/predict_XPASS.R
| predict_XPASS | R Documentation |
Construct PRS from the XPASS output.
Description
This function use the XPASS posterior means to construct PRS for the prediction samples.
Usage
predict_XPASS(pm, file_predgeno)
Arguments
pm |
The output 'mu' obtained from the 'XPASS' function, which stores the posterior means computed by XPASS. |
file_predgeno |
Prefix of the prediction samples' genotypes in plink format. |
Value
A data frame storing the PRS generated by using mu1, mu2, mu_XPASS1, and mu_XPASS2, respectively.
Examples
See vignette.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.