update_states_mutual: Update states on the island

In Yangshen0325/specmutual: Evolution of Mutualism Based on Speciation, Immigration and Extinction

Update states on the island

Description

Update states on the island

Usage

update_states_mutual(
  M0,
  Mt,
  status_p,
  status_a,
  maxplantID,
  maxanimalID,
  timeval,
  total_time,
  rates,
  possible_event,
  island_spec,
  stt_table,
  transprob
)

Arguments

M0	Mainland matrix
Mt	Island matrix
status_p	Plant species status, with 1 present, 0 absent on island
status_a	Animal species status, with 1 present, 0 absent on island
maxplantID	Maximum plant species id on island
maxanimalID	Maximum animal species id on island
timeval	Time value during simulation, ranging from island age to the present
total_time	Island age (total simulation time)
rates	All kinds of rates
possible_event	Possible event that happening on island
island_spec	A data frame with species information on island
stt_table	A data frame with the number of species through time
transprob	A numerical

Value

A list

Yangshen0325/specmutual documentation built on Feb. 19, 2025, 10:36 p.m.