what: search for m/z in from the idiom metabolomics database
In YonghuiDong/MSbox: Mass Spectrometry Tools
what R Documentation
search for m/z in from the idiom metabolomics database
Description
tentative metabolite identification based on m/z value search
Usage
what(myMZ, mode = NULL, ppm = 5, useDB = "HMDB")
Arguments
myMZ
m/z values
mode
ionization mode, either positive '+' or negative '-'
ppm
mass tolerance, default value = 10
useDB
which database to use, HMDB or KEGG? default is HMDB
Author(s)
Yonghui Dong
Examples
a = what(133.014, mode = '-', ppm = 10)
YonghuiDong/MSbox documentation built on Jan. 12, 2023, 3:48 p.m.
R Package Documentation
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| what | R Documentation |
search for m/z in from the idiom metabolomics database
Description
tentative metabolite identification based on m/z value search
Usage
what(myMZ, mode = NULL, ppm = 5, useDB = "HMDB")
Arguments
myMZ |
m/z values |
mode |
ionization mode, either positive '+' or negative '-' |
ppm |
mass tolerance, default value = 10 |
useDB |
which database to use, HMDB or KEGG? default is HMDB |
Author(s)
Yonghui Dong
Examples
a = what(133.014, mode = '-', ppm = 10)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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