treedata-class: Class "treedata" This class stores phylogenetic tree with...
In YuLab-SMU/tidytree: A Tidy Tool for Phylogenetic Tree Data Manipulation
treedata-class R Documentation
Class "treedata"
This class stores phylogenetic tree with associated data
Description
Class "treedata"
This class stores phylogenetic tree with associated data
Slots
filetree file
treetextnewick tree string
phylophylo object for tree structure
dataassociated data
extraInfoextra information, reserve for merge_tree
tip_seqtip sequences
anc_seqancestral sequences
seq_typesequence type, one of NT or AA
tipseq_filetip sequence file
ancseq_fileancestral sequence file
infoextra information, e.g. metadata, software version etc.
Author(s)
Guangchuang Yu https://guangchuangyu.github.io
YuLab-SMU/tidytree documentation built on July 30, 2024, 8:07 p.m.
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| treedata-class | R Documentation |
Class "treedata" This class stores phylogenetic tree with associated data
Description
Class "treedata" This class stores phylogenetic tree with associated data
Slots
filetree file
treetextnewick tree string
phylophylo object for tree structure
dataassociated data
extraInfoextra information, reserve for merge_tree
tip_seqtip sequences
anc_seqancestral sequences
seq_typesequence type, one of NT or AA
tipseq_filetip sequence file
ancseq_fileancestral sequence file
infoextra information, e.g. metadata, software version etc.
Author(s)
Guangchuang Yu https://guangchuangyu.github.io
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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