lbrat_read_phe: Read in Phenotype and Genotype Files
In ZWang-Lab/LBRAT: Retrospective Association Testing for Longitudinal Binary Outcomes
Description
Usage
Arguments
Value
Description
This function loads a phenotype file, a covariates file and a plink fam file
it's able to match the phenotype ID with genotype ID and generate input dataframe
for L-BRAT/RGMMAT test.
Usage
1
lbrat_read_phe(y.file, cov.file, plink.file)
Arguments
y.file
Path to the input file
cov.file
Path to the covariates file
plink.file
Path to the plink file frefix
Value
A formatted dataframe used as L-BRAT/RGMMAT test input
ZWang-Lab/LBRAT documentation built on March 12, 2020, 7:26 p.m.
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Description Usage Arguments Value
Description
This function loads a phenotype file, a covariates file and a plink fam file it's able to match the phenotype ID with genotype ID and generate input dataframe for L-BRAT/RGMMAT test.
Usage
1 | lbrat_read_phe(y.file, cov.file, plink.file)
|
Arguments
y.file |
Path to the input file |
cov.file |
Path to the covariates file |
plink.file |
Path to the plink file frefix |
Value
A formatted dataframe used as L-BRAT/RGMMAT test input
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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