API for ZhenWei10/exomePeak
exome-based anlaysis of MeRIP-Seq data: peak calling and differential analysis
| Global functions | |
|---|---|
| .bed2grangeslist | Source code |
| .diff.consistency.evaluate | Source code |
| .divide.anno.into.batches | Source code |
| .divide.anno.into.batches.small | Source code |
| .exomepeak_notification | Source code |
| .get.bam.chrs | Source code |
| .get.bam.read.length | Source code |
| .get.block.from.rna.peak | Source code |
| .get.check.points | Source code |
| .get.check.points.reads.count | Source code |
| .get.gene.anno | Source code |
| .get.peak.from.loci | Source code |
| .get.peak.reads.count | Source code |
| .get.reads.count | Source code |
| .get.sample.id | Source code |
| .get.table.peak.result | Source code |
| .merge.and.compare.two.different.conditions | Source code |
| .peak.calling.module | Source code |
| .read.gtf | Source code |
| .readTxDb2 | Source code |
| .remove.local.anomalities | Source code |
| .report.diff.peak.based.on.result | Source code |
| .report.peak.based.on.result | Source code |
| .xls2Grangeslist | Source code |
| RMT | Man page Source code |
| bltest | Man page Source code |
| ctest | Man page Source code |
| exomePeak | Man page |
| exomePeak-package | Man page |
| exomepeak | Man page Source code |
| rhtest | Man page Source code |
