Files in ZhenWei10/exomePeak
exome-based anlaysis of MeRIP-Seq data: peak calling and differential analysis

.DS_Store
.Rbuildignore
.gitattributes
.gitignore
DESCRIPTION
NAMESPACE
NEWS
R/RMT.R R/bed2transcriptdb.R R/bltest.r R/ctest.R R/diff.consistency.evaluate.R R/divide.anno.into.batches.R R/exomepeak.R R/exomepeak_notification.R R/get.bam.chrs.R R/get.bam.read.length.R R/get.block.from.rna.peak.R R/get.check.points.R R/get.check.points.reads.count.R R/get.gene.anno.R R/get.peak.from.loci.R R/get.peak.reads.count.R R/get.reads.count.R R/get.sample.id.R R/get.table.peak.result.R R/merge.and.compare.two.different.conditions.R R/peak.calling.module.R R/read.gtf.R R/remove.local.anomalities.R R/report.diff.peak.based.on.result.R R/report.peak.based.on.result.R R/rhtest.R README.Rmd README.md
inst/.DS_Store
inst/CITATION
inst/extdata/IP1.bam
inst/extdata/IP1.bam.bai
inst/extdata/IP2.bam
inst/extdata/IP2.bam.bai
inst/extdata/IP3.bam
inst/extdata/IP3.bam.bai
inst/extdata/IP4.bam
inst/extdata/IP4.bam.bai
inst/extdata/Input1.bam
inst/extdata/Input1.bam.bai
inst/extdata/Input2.bam
inst/extdata/Input2.bam.bai
inst/extdata/Input3.bam
inst/extdata/Input3.bam.bai
inst/extdata/example.gtf
inst/extdata/treated_IP1.bam
inst/extdata/treated_IP1.bam.bai
inst/extdata/treated_Input1.bam
inst/extdata/treated_Input1.bam.bai
man/RMT.Rd man/bltest.Rd man/ctest.Rd man/exomePeak-package.Rd man/exomepeak.Rd man/rhtest.Rd
vignettes/.DS_Store
vignettes/exomePeak-Overview.Rmd
ZhenWei10/exomePeak documentation built on April 8, 2020, 1:21 a.m.