IsotopologueParam: Isotopoluage target generation parameter setup

In ZhuMetLab/MetTracer: Tracing isotope labelled metabolites

Isotopoluage target generation parameter setup

Description

Isotopoluage target generation parameter setup

Usage

IsotopologueParam(
 
    file.id = "unlabelled/MetProcess-Result/MRN_annotation_result/MRN.annotation.result.csv",
  file.xset = "unlabelled/xset-centWave-final.Rda",
  method = c("max", "sum", "median"),
  value = c("into", "intb", "maxo"),
  rt.extend = 30,
  is.plot.pattern = FALSE
)

Arguments

file.id	MetDNA annotation result file
file.xset	xcms peak detection file
method	method for creating representative peak profile, (max, sum, median)
value	value field for creating representative peak profile (into, intb, maxo)
rt.extend	extention thresholds for RT
is.plot.pattern	if plot isotopoluage patterns

Value

an extractTargetsParam object

ZhuMetLab/MetTracer documentation built on Sept. 11, 2022, 1:11 p.m.