testEnrichment: Simple test for enrichment in a given set of genes
In Zouter/modex:
Description
Usage
Arguments
Value
Description
Assumes gsets is already filtered for background, will not check this!
Usage
1
testEnrichment(module, gsets, background)
Arguments
module
character vector containing the genes tested for enrichment
gsets
a list containing lists of genes
background
character vector
Value
Dataframe containing for every gene set which passed the filtering:
p-value of enrichment
q-value of enrichment (p-value corrected for multiple testing)
estimated odds score of enrichment, how much more likely is a given gene set to be part of
Zouter/modex documentation built on May 10, 2019, 1:59 a.m.
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Description Usage Arguments Value
Description
Assumes gsets is already filtered for background, will not check this!
Usage
1 | testEnrichment(module, gsets, background)
|
Arguments
module |
character vector containing the genes tested for enrichment |
gsets |
a list containing lists of genes |
background |
character vector |
Value
Dataframe containing for every gene set which passed the filtering:
p-value of enrichment
q-value of enrichment (p-value corrected for multiple testing)
estimated odds score of enrichment, how much more likely is a given gene set to be part of
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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