Files in a-henderson91/vectorbornefit
MCMC fit SEIR model of vetor borne transmission
.DS_Store
.Rbuildignore
.gitattributes
.gitignore
CreateVecbornefit.R
DESCRIPTION
NAMESPACE
R/.DS_Store
R/DEPRECATED_SLOW_fn_simulate_deterministic_noage_denvimmunity.R
R/fn_ComputePrior.R
R/fn_DENV_MCMC.R
R/fn_LoadMultistartData.R
R/fn_LoadPosteriors.R
R/fn_MCMCloop_withDENVimmunity.R
R/fn_MCMCloop_withDENVimmunity_adapt.R
R/fn_MCMCloop_withDENVimmunity_adaptPARTIAL.R
R/fn_NOLIKELIHOOD_MCMCloop_withDENVimmunity_adapt.R
R/fn_ResultsSetUp.R
R/fn_ResultsSetUpPartial.R
R/fn_SampleTheta.R
R/fn_SampleThetaPartial.R
R/fn_WeatherFit.R
R/fn_calculateR0.R
R/fn_calculateR0_freeze.R
R/fn_det_modelR_DENVimm.R
R/fn_det_modelR_DENVimmPartial.R
R/fn_deterministic_modelR_mosqpop.R
R/fn_ggplottheme_zikafiji.R
R/fn_seasonal_decline.R
R/fn_simulate_deterministic_noage_denvimmunity.R
README.md
man/.DS_Store
man/AdaptMCMCloop_withDENVimmunity.Rd
man/AdaptMCMCloop_withDENVimmunityPartial.Rd
man/ComputePrior.Rd
man/DENV_mcmc.Rd
man/DEPRECATED_simulate_deterministic_noage_DENVimm.Rd
man/Deterministic_modelR_final_DENVimmmunity.Rd
man/Deterministic_modelR_final_DENVimmmunityPartial.Rd
man/Deterministic_modelR_mosqpop.Rd
man/MCMCloop_withDENVimmunity.Rd
man/NOLIKELIHOOD_AdaptMCMCloop_withDENVimmunity.Rd
man/ReportC.Rd
man/Run_simulation.Rd
man/SampleTheta.Rd
man/SampleThetaPartial.Rd
man/calculate_r0.Rd
man/calculate_r0_adam.Rd
man/control_f.Rd
man/extinct.Rd
man/intro_f.Rd
man/likelihood_fn.Rd
man/load.data.multistart.Rd
man/load.posteriors.Rd
man/results_set_up.Rd
man/results_set_upPartial.Rd
man/seasonal_f.Rd
man/simulate_deterministic_noage_DENVimm.Rd
man/theme_zika_fiji.Rd
man/weather.fit.Rd
vectorbornefit.Rproj
