NEWS.md

In acidgenomics/r-acidcli: Acid Genomics Command Line Interface

AcidCLI 0.3.2 (2025-04-24)

Minor changes:

• Reformatted code using air format.

AcidCLI 0.3.1 (2025-03-21)

Minor changes:

• Relaxed R dependency to 4.0 for better backwards compatibility.
• Updated lintr configuration and checks.

AcidCLI 0.3.0 (2023-10-03)

Major changes:

• Starting a new release series, matching other Acid Genomics package updates.

AcidCLI 0.2.8 (2023-08-09)

Major changes:

• Now requiring R 4.3.
• h1 no longer returns an extra line break under the bottom separator.

AcidCLI 0.2.7 (2023-02-08)

Minor changes:

• abort: Improved call suppression in error message header when call = FALSE. Need to pass call = NULL internally to rlang abort to fix this.

AcidCLI 0.2.6 (2023-01-30)

Minor changes:

• abort, inform, warn: Reworked internal code and imports to ensure that rlang is always installed. cli package update now makes rlang conditional, which caused our error messages to fail in the rare edge case that the rlang package is not available. We're now ensuring rlang gets imported directly rather than relying on cli to avoid this situation.

AcidCLI 0.2.5 (2022-11-08)

Minor changes:

• Tightened R 4.2 dependency requirements prior to bioconda recipe update.

AcidCLI 0.2.4 (2022-10-20)

Minor changes:

• h1: Reworked to span the width of console.
• Improved fallback support for consoles without UTF-8 support.

AcidCLI 0.2.3 (2022-09-13)

Major changes:

• h1: Reworked default appearance to use ==== separared by line breaks.
• h2-h7: Removed test tube emoji before #.

AcidCLI 0.2.2 (2022-05-23)

Minor changes:

• Updated lintr and testthat checks.

AcidCLI 0.2.1 (2022-04-29)

Minor changes:

• Updated R version dependency to 4.2.

AcidCLI 0.2.0 (2022-03-11)

Starting a new release series for 2022.

Minor changes:

• Updated R dependency to 4.1, matching Bioconductor 3.14 release.
• Updated other package dependencies: cli (3.2.0), crayon (1.5.0), and goalie (0.6.0).

AcidCLI 0.1.7 (2021-09-13)

Minor changes:

• toInlineString: Need to fix default value of class, which should be "val" instead of "var".

AcidCLI 0.1.6 (2021-09-08)

Minor changes:

• toInlineString: Improved default values for n (now 5) and class (now "val" instead of "var").

AcidCLI 0.1.5 (2021-08-18)

Minor changes:

• abort, inform, warn: Improved line break handling (e.g. "\n") inside of calls, matching expected conventions in base stop, message, and warning respectively.

AcidCLI 0.1.4 (2021-08-14)

Minor changes:

• abort: Added call argument (enabled by default), which allows for setting of verbosity in return -- e.g. whether to return backtrace or not. This functions similar to the .call argument defined in base stop function.

AcidCLI 0.1.3 (2021-08-13)

Minor changes:

• abort, inform, warn now support condition class (e.g. simpleError) as an input source, which is useful for handoff in tryCatch calls.
• Added testthat code coverage. Package coverage is currently 100%.

AcidCLI 0.1.2 (2021-07-12)

New functions:

Added wrappers for new rlang-inspired handlers:

• abort wraps cli_abort.
• inform wraps cli_inform.
• warn wraps cli_warn.

AcidCLI 0.1.1 (2021-03-31)

Minor changes:

• Changed => to #, improving consistency with koopa shell bootloader.

AcidCLI 0.1.0 (2021-02-26)

Minor changes:

• Package up initial release suitable for bioconda.
• Updated goalie dependency.
• Added package documentation information to manual.

AcidCLI 0.0.6 (2021-02-02)

Minor changes:

• Now using goalie package internally for assert checks.

AcidCLI 0.0.5 (2021-01-18)

Minor changes:

• dl: Ensure definition list is indented.

AcidCLI 0.0.4 (2021-01-10)

Minor changes:

• toInlineString: Include "..." when input is truncated.

AcidCLI 0.0.3 (2021-01-10)

New functions:

• Added toInlineString, which helps return a formatted inline variable string.

AcidCLI 0.0.2 (2021-01-07)

Minor changes:

• Bug fix to allow inline styles inside of headers (e.g. h1, h2, ...).

AcidCLI 0.0.1 (2021-01-05)

Initial release.

acidgenomics/r-acidcli documentation built on June 13, 2025, 7:08 p.m.