plotDegHeatmap: Differentially expressed gene heatmap

In acidgenomics/r-acidgenerics: Acid Genomics Generics

Differentially expressed gene heatmap

Description

This function is an extension of plotHeatmap() that is optimized for automatic handling differentially expressed genes, rather than requiring manual input of a gene vector. All of the optional parameters for plotHeatmap() are also supported by this function.

Usage

plotDegHeatmap(object, ...)

Arguments

object	Object.
...	Additional arguments.

Details

To adjust the annotation columns, modify the colData() of the counts argument, which must contain a SummarizedExperiment.

Value

Plot.

Examples

showMethods("plotDegHeatmap")

acidgenomics/r-acidgenerics documentation built on July 4, 2025, 5:50 a.m.