EggNOG-class: EggNOG database annotations

EggNOG-classR Documentation

EggNOG database annotations

Description

EggNOG is a database of biological information hosted by the EMBL. It is based on the original idea of COGs (clusters of orthologous groups) and expands that idea to non-supervised orthologous groups constructed from numerous organisms. eggNOG stands for evolutionary genealogy of genes: Non-supervised Orthologous Groups.

Details

This class extends list and contains:

  1. "cogFunctionalCategories": Cluster of Orthologous Groups (COG) functional category information.

  2. "annotations": up-to-date functional descriptions and categories for Eukaryotes Non-supervised Orthologous Groups (euNOG) and Non-supervised Orthologous Groups (NOG) protein identifiers.

Value

EggNOG.

Note

Updated 2019-08-13.


acidgenomics/r-eggnog documentation built on Oct. 13, 2023, 4:48 a.m.