geneIds: Gene identifiers
In acidgenomics/wormbase: WormBase Annotation Data
geneIds R Documentation
Gene identifiers
Description
Gene identifiers
Usage
geneIds(release = getOption(x = "wormbase.release", default = NULL))
Arguments
release
character(1) or NULL.
WormBase release. If NULL (recommended), defaults to current production
release release available on the WormBase website. Legacy releases can be
specified as a character string (e.g. "WS267").
Value
DataFrame.
Note
As of WS269 release, some non-N2 gene IDs are included in the flat
files available on the WormBase FTP server. These annotations are removed
from the return here, using grep matching to return only WBGene entries.
Updated 2021-02-18.
Examples
x <- geneIds()
print(x)
acidgenomics/wormbase documentation built on Oct. 4, 2023, 6:48 a.m.
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| geneIds | R Documentation |
Gene identifiers
Description
Gene identifiers
Usage
geneIds(release = getOption(x = "wormbase.release", default = NULL))
Arguments
release |
|
Value
DataFrame.
Note
As of WS269 release, some non-N2 gene IDs are included in the flat
files available on the WormBase FTP server. These annotations are removed
from the return here, using grep matching to return only WBGene entries.
Updated 2021-02-18.
Examples
x <- geneIds()
print(x)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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