addFreqBars: Title

In adam2o1o/treekoR: Cytometry Cluster Hierarchy and Cellular-to-phenotype Associations

Title

Description

a function to add the frequency bars for each cluster

Usage

addFreqBars(
  p,
  clusters,
  offset = 0.75,
  bar_length = 3,
  bar_width = 0.4,
  freq_labels = FALSE
)

Arguments

p	a phylogenetic tree plot created from the ggtree() function
clusters	a vector representing the cell type or cluster of each cell (can be character or numeric)
offset	distance between the heatmap and frequency bars
bar_length	length of bar with max frequency
bar_width	width of each frequency bar
freq_labels	boolean indicated whether or not to show frequency bar labels

Value

an interactive ggplot graph object with frequency bars of clusters alongside heatmap of cluster median expression

adam2o1o/treekoR documentation built on June 2, 2023, 11:42 p.m.