Files in adeschen/similaRpeak
Metrics to estimate a level of similarity between two ChIP-Seq profiles
.Rbuildignore
.github/.gitignore
.github/workflows/check-bioc.yaml
.github/workflows/test-coverage.yaml
.gitignore
DESCRIPTION
NAMESPACE
NEWS
R/metrics.R
R/metricsMethods.R
R/similaRpeak.R
R/similaRpeakMethods.R
README.md
data/chr7Profiles.RData
data/demoProfiles.RData
inst/extdata/align1.bam
inst/extdata/align1.bam.bai
inst/extdata/list1.bed
inst/unitTests/Makefile
inst/unitTests/test_metrics.R
inst/unitTests/test_metricsMethods.R
inst/unitTests/test_similaRpeak.R
man/DiffPosMax.Rd
man/Metric.Rd
man/MetricFactory.Rd
man/RatioArea.Rd
man/RatioIntersect.Rd
man/RatioMaxMax.Rd
man/RatioNormalizedIntersect.Rd
man/SpearmanCorrelation.Rd
man/chr7Profiles.Rd
man/demoProfiles.Rd
man/diffPosMaxMethod.Rd
man/ratioAreaMethod.Rd
man/ratioIntersectMethod.Rd
man/ratioMaxMaxMethod.Rd
man/similaRpeak-package.Rd
man/similarity.Rd
man/spearmanCorrMethod.Rd
similaRpeak.Rproj
tests/runTests.R
vignettes/metrics_small.gif
vignettes/similaRpeak.Rmd
