R/data.R

In admahood/neondiveRsity: Process NEON Plant Data for Ecological Analysis

#' Polygons of National Ecological Observatory Network Core and Relocatable Terrestrial Sites
#'
#' Note: Some sites have more than one polygon. There are 59 polygons and 47 total sites.
#'
#' @format ## 'site_polygons'
#' A simple feature collection with 59 features and 8 fields
#' \describe{
#'  \item{domainNumb}{Domain Number}
#'  \item{domainName}{Domain Name}
#'  \item{siteType}{Site type. Core or Relocatable}
#'  \item{siteName}{Site name}
#'  \item{siteID}{Four letter site ID. Used in npe_download()}
#'  \item{siteHost}{Organization hosting the site}
#'  \item{areaKm2}{Area of the site in square kilometers}
#'  \item{acres}{Area of the site in acres}
#'  \item{geometry}{list column containing geometry information for each polygon}
#' }
#' @source <https://www.neonscience.org>
"site_polygons"

#' National Ecological Observatory Network Core and Relocatable Terrestrial Sites
#'
#' Note: Some sites have more than one polygon. There are 59 polygons and 47 total sites.
#'
#' @format ## 'sites'
#' data frame with 47 features and 8 fields
#' \describe{
#'  \item{domainNumb}{Domain Number}
#'  \item{domainName}{Domain Name}
#'  \item{siteType}{Site type. Core or Relocatable}
#'  \item{siteID}{Four letter site ID. Used in npe_download()}
#'  \item{koppen_fine}{Koppen-Geiger climate classification from Beck et al 2023}
#'  \item{koppen_coarse}{Coarsest category of K-G climate classification from Beck et al 2023}
#'  \item{ai}{Annual aridity index from Zomer & Trabucco 2022}
#'  \item{ai_class}{Climate classification based on the aridity index from Zomer & Trabucco 2022}
#' }
#' @source <https://www.neonscience.org>
#' @source <https://doi.org/10.6084/m9.figshare.7504448.v5>
#' @source <https://doi.org/10.1038/s41597-023–02549‑6>
"sites"

#' Plant Presence and Percent Cover Data for Domain 14
#'
#' This includes Jornada Experimental Range and Santa Rita Experimental Range
#'
#' @format ## 'D14'
#' A list with 8 items, 2 of which are used by neonPlantEcology
#' @source <https://doi.org/10.48443/9579-a253>
#' @source <https://data.neonscience.org/data-products/DP1.10058.001>
"D14"

#' Plot centroids for the entire NEON network
#'
#' @format ## 'plot_centroids'
#' A simple feature collection with 3842 features and 36 fields
#' @source <https://www.neonscience.org>
"plot_centroids"