Files in aemon-j/LakeEnsemblR
Run Ensemble of Lake Models
.Rbuildignore
.github/.gitignore
.github/workflows/build.yaml
.github/workflows/codecov.yaml
.github/workflows/lint.yaml
.github/workflows/pkgdown.yaml
.gitignore
DESCRIPTION
LICENSE
NAMESPACE
NEWS.md
R/add_ncdf_output.R
R/analyse_ncdf.R
R/analyse_strat.R
R/calc_fit.R
R/calc_hmix.R
R/calc_stats.R
R/cali_ensemble.R
R/check_config.R
R/create_netcdf_output.R
R/export_config.R
R/export_dirs.R
R/export_extinction.R
R/export_flow.R
R/export_init_cond.R
R/export_location.R
R/export_meteo.R
R/export_model_parameters.R
R/export_output_settings.R
R/export_time.R
R/format_flow.R
R/format_met.R
R/get_config_value.R
R/get_json_value.R
R/get_mylakeconfig_value.R
R/get_output.R
R/get_template.R
R/get_yaml_multiple.R
R/helper_calibration.R
R/helper_flow.R
R/helpers.R
R/input_config_value.R
R/input_json.R
R/input_mylakeconfig.R
R/input_yaml_multiple.R
R/load_var.R
R/make_temp_dir.R
R/plot_LHC.R
R/plot_ensemble.R
R/plot_heatmap.R
R/plot_resid.R
R/read_flake_out.R
R/run_ensemble.R
R/run_lint.R
R/scale_met.R
R/start_mess.R
R/sysdata.rda
R/time_average.R
README.Rmd
README.md
_pkgdown.yml
codecov.yml
data-raw/met_var_dic.R
data/lake_var_dic.csv
data/lake_var_dic.rda
data/met_input.csv
data/met_input.rda
data/met_var_dic.csv
data/met_var_dic.rda
data/pars_dic.csv
data/pars_dic.rda
data/var_names_dic.rda
inst/CITATION
inst/extdata/LakeEnsemblR_Kw_template.csv
inst/extdata/LakeEnsemblR_init_temp_profile_template.csv
inst/extdata/albedot1.bin
inst/extdata/feeagh/.gitignore
inst/extdata/feeagh/LakeEnsemblR.yaml
inst/extdata/feeagh/LakeEnsemblR_bathymetry_standard.csv
inst/extdata/feeagh/LakeEnsemblR_ice-height_standard.csv
inst/extdata/feeagh/LakeEnsemblR_inflow_standard.csv
inst/extdata/feeagh/LakeEnsemblR_meteo_standard.csv
inst/extdata/feeagh/LakeEnsemblR_outflow_standard.csv
inst/extdata/feeagh/LakeEnsemblR_v1.yaml
inst/extdata/feeagh/LakeEnsemblR_wtemp_profile_standard.csv
inst/extdata/test_model_packages.R
inst/start_mess
man/LHC_model.Rd
man/add_netcdf_output.Rd
man/analyse_ncdf.Rd
man/analyse_strat.Rd
man/calc_fit.Rd
man/calc_hmix.Rd
man/calc_stats.Rd
man/cali_ensemble.Rd
man/change_pars.Rd
man/check_master_config.Rd
man/cost_model.Rd
man/create_netcdf_output.Rd
man/export_config.Rd
man/export_dirs.Rd
man/export_extinction.Rd
man/export_flow.Rd
man/export_init_cond.Rd
man/export_location.Rd
man/export_meteo.Rd
man/export_model_parameters.Rd
man/export_output_settings.Rd
man/export_time.Rd
man/figures/LER_modularization.png
man/figures/LER_overview.PNG
man/figures/MCMC_example.png
man/figures/README-plot-ensemble-1.png
man/figures/README-plot-ensemble-2.png
man/figures/README-post-process-1.png
man/figures/README-post-process-2.png
man/figures/ensemble_heatmap.png
man/figures/logo.png
man/figures/model_ensemble_diagnostics.png
man/figures/model_ensemble_stratification.png
man/figures/model_ensemble_timeseries_depth.png
man/figures/model_ensemble_vertical_depth.png
man/figures/plot_cali_gotm.png
man/format_inflow.Rd
man/format_outflow.Rd
man/get_config_value.Rd
man/get_json_value.Rd
man/get_model_met_name.Rd
man/get_mylakeconfig_value.Rd
man/get_output.Rd
man/get_template.Rd
man/get_yaml_multiple.Rd
man/input_config_value.Rd
man/input_json.Rd
man/input_mylakeconfig.Rd
man/input_yaml_multiple.Rd
man/load_LHC_results.Rd
man/load_var.Rd
man/make_script.Rd
man/plot_LHC.Rd
man/plot_ensemble.Rd
man/plot_heatmap.Rd
man/plot_resid.Rd
man/qual_fun.Rd
man/read_flake_out.Rd
man/run_ensemble.Rd
man/run_lint.Rd
man/scale_met.Rd
man/time_average.Rd
man/wrap_model.Rd
pkgdown/favicon/apple-touch-icon.png
pkgdown/favicon/favicon-96x96.png
pkgdown/favicon/favicon.ico
pkgdown/favicon/favicon.svg
pkgdown/favicon/site.webmanifest
pkgdown/favicon/web-app-manifest-192x192.png
pkgdown/favicon/web-app-manifest-512x512.png
tests/testthat.R
tests/testthat/test_00_pkg_data.R
vignettes/articles/.gitignore
vignettes/articles/calibrating-lakeensemblr.Rmd
vignettes/articles/docker.Rmd
vignettes/articles/faq.Rmd
vignettes/articles/from-v1-0-to-v1-1-changes.Rmd
vignettes/articles/images/LER_modularization.png
vignettes/articles/images/MCMC_example.png
vignettes/articles/images/model_ensemble_diagnostics.png
vignettes/articles/images/model_ensemble_stratification.png
vignettes/articles/images/model_ensemble_timeseries_depth-01.png
vignettes/articles/images/model_ensemble_timeseries_depth.png
vignettes/articles/images/plot_cali_gotm.png
vignettes/articles/installation-issues.Rmd
vignettes/articles/lake-models.Rmd
vignettes/articles/package-structure.Rmd
vignettes/articles/post-processing-lakeensemblr.Rmd
vignettes/articles/running-lakeensemblr-in-parallel.Rmd
vignettes/articles/running-lakeensemblr.Rmd
vignettes/articles/setting-up-lakeensemblr.Rmd
vignettes/articles/what-is-a-netcdf-file.Rmd
vignettes/lakeensemblr-overview.Rmd
vignettes/preamble-latex.tex
vignettes/references.bib
