get.homology.template: Create a donor oligo based on input sequence and sgRNA guides
In ahmcewan/templateDesigner: What the Package Does (One Line, Title Case)
Description
Usage
Arguments
Value
View source: R/templateDesigner.R
Description
This function finds 60bp homology arms up and downstream of the sgRNA cut site and
merges the left homology arm, insert and right homology arm to build a donor template
Usage
1
get.homology.template(pam.res, full.seq, ins)
Arguments
pam.res
The dataframe results after running find.pams()
full.seq
A sequence 150bp or longer
ins
A DNA sequence that acts as the insert
Value
a dataframe with the guide sequence and the corresponding donor oligo
ahmcewan/templateDesigner documentation built on Oct. 12, 2020, 12:04 a.m.
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Description Usage Arguments Value
View source: R/templateDesigner.R
Description
This function finds 60bp homology arms up and downstream of the sgRNA cut site and merges the left homology arm, insert and right homology arm to build a donor template
Usage
1 | get.homology.template(pam.res, full.seq, ins)
|
Arguments
pam.res |
The dataframe results after running find.pams() |
full.seq |
A sequence 150bp or longer |
ins |
A DNA sequence that acts as the insert |
Value
a dataframe with the guide sequence and the corresponding donor oligo
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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