Files in ahmedelmahy/eczemalymphoma

.Rbuildignore

.gitignore

DESCRIPTION

NAMESPACE

R/1_data_preprocessing/DESeq_processing_functions.R R/1_data_preprocessing/generate_deseq_ratio_df.R R/1_data_preprocessing/generate_voom_ratio_df.R R/approach1_patient_normal_ratio.R R/approach2_with_design.R R/calc_ebg.R R/classifier_funcs.R R/classifier_funcs2.R R/explore_heatmap.R R/funny1.R R/funny2.R R/funny3.R R/gbm.R R/glmnet_compare_sampling_techniques.R R/happy5.R R/happy7.R R/load.R R/shiny_pheatmap.R R/stated_clearly.R R/subproblem1_degs/method1_DESeq/appraoch2_disease1normal2disease2normal1/multiple_comparision_then_intersection.R R/subproblem1_degs/method2_voom/approach1_without_design.R

R/subproblem1_degs/method2_voom/approach3_voom_ratio.R

R/subproblem1_degs/method2_voom/voom_load.R R/subproblem2_gene_selection/caret_workflow/prepare_for_caret_workflow.R R/subproblem2_gene_selection/caret_workflow/subsubproblem1_balanced_sampling/RF_compare_sampling_techniques.R R/subproblem2_gene_selection/caret_workflow/subsubproblem1_balanced_sampling/ROC_for_choosing_sampling_technique.R R/subproblem2_gene_selection/caret_workflow/subsubproblem1_balanced_sampling/gbm_compare_sampling_techiques.R R/subproblem2_gene_selection/caret_workflow/subsubproblem2_gene_selection/compare_models_and_sampling_approaches.R R/subproblem2_gene_selection/caret_workflow/subsubproblem2_gene_selection/compare_selected_genes.R R/subproblem2_gene_selection/caret_workflow/subsubproblem2_gene_selection/select_features_merge_all.R R/subproblem2_gene_selection/caret_workflow/subsubproblem2_gene_selection/select_features_model_independent_metrics.R R/subproblem2_gene_selection/caret_workflow/subsubproblem2_gene_selection/select_features_with_recursive_feature_elimination.R

R/subproblem2_gene_selection/feature_selection_myway_1.R

R/subproblem2_gene_selection/prepare_for_analysis.R R/subproblem2_gene_selection/select_features_lasso.R R/subproblem2_gene_selection/select_features_stepwise_lm.R R/svmRadial_compare_sampling_techniques.R

R/training_models_on_sel_genes.R

R/untitle3.R R/untitled2.R R/visualisation_functions/MDS_heuristic_plot_for_selected_genes.R R/visualisation_functions/compare_selected_features_barplot.R classifier.pdf

df_lym_ecz.csv

eczlym.Rproj

man/hello.Rd

readme.lyx~

scripts/classifier_wrap2.R

ahmedelmahy/eczemalymphoma documentation built on May 26, 2019, 3:35 p.m.