API for ahmohamed/vissEServerRpkg
Wrapping functions for vissE server to use
| Global functions | |
|---|---|
| addQC | Source code |
| cellThresholds | Source code |
| cluster_graph | Source code |
| doFA | Source code |
| doNormalise | Source code |
| doSelectFeatures | Source code |
| dropLowCount | Source code |
| dropNeg | Source code |
| exportReducedDim | Source code |
| feature_HVGs | Source code |
| feature_all | Source code |
| filterCells | Source code |
| fun_if | Source code |
| funwrapper | Source code |
| geneSummary | Source code |
| genesetSummary | Source code |
| getCollections | Source code |
| getPPI | Source code |
| getdata | Source code |
| handle_ids | Source code |
| nice | Source code |
| normalise_none | Source code |
| normalise_scran | Source code |
| normalise_sct | Source code |
| qmax | Source code |
| readCosMx | Source code |
| readSce | Source code |
| readSpe | Source code |
| readVisiumXY | Source code |
| readXeniumXY | Source code |
| read_3files | Source code |
| runExample | Source code |
| runNMF | Source code |
| runPCA | Source code |
| runTSNE | Source code |
| runUMAP | Source code |
| safely2 | Source code |
| scPreprocess | Source code |
| scVisseFA | Source code |
| subsetCollection | Source code |
| summarizeFA | Source code |
| suppressively | Source code |
| to_symbol | Source code |
| visseFA | Source code |
| visseWrapper | Source code |
| with_handlers | Source code |
