tcga_variable_subset: An example dataset of the most clinically relevant TCGA...
In ahnjedid/MetaConIdentifier: Metadata Confounding Identifier
Description
Usage
Format
Source
Examples
Description
An example dataset of the most clinically relevant TCGA metadata variables
to subset. The format should be utilized for variable_subset parameter in
standardize_metadata().
Usage
1
Format
A character vector of metadata variable names.
- cgc_case_primary_therapy_outcome_success
Treatment outcome
- cgc_case_primary_site
Tissue type
- gc_sample_tissue_source_site
Site/location where cancer sample
was retrieved
- cgc_case_histological_diagnosis
Precise cancer diagnosis
- cgc_case_gender
Gender of subject
- cgc_case_race
Race of subject
- cgc_case_age_at_diagnosis
Age when subject was diagnosed
with cancer
Source
Jedid Ahn
Examples
1
2
3
4
## Not run:
tcga_variable_subset
## End(Not run)
ahnjedid/MetaConIdentifier documentation built on Dec. 18, 2021, 11:26 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Format Source Examples
Description
An example dataset of the most clinically relevant TCGA metadata variables
to subset. The format should be utilized for variable_subset parameter in
standardize_metadata().
Usage
1 |
Format
A character vector of metadata variable names.
- cgc_case_primary_therapy_outcome_success
Treatment outcome
- cgc_case_primary_site
Tissue type
- gc_sample_tissue_source_site
Site/location where cancer sample was retrieved
- cgc_case_histological_diagnosis
Precise cancer diagnosis
- cgc_case_gender
Gender of subject
- cgc_case_race
Race of subject
- cgc_case_age_at_diagnosis
Age when subject was diagnosed with cancer
Source
Jedid Ahn
Examples
1 2 3 4 | ## Not run:
tcga_variable_subset
## End(Not run)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.