Files in ahonkela/tigre
Transcription factor Inference through Gaussian process Reconstruction of Expression
DESCRIPTION
NAMESPACE
R/AllClasses.R
R/GPPlot.R
R/GPrank.R
R/baselineFunctions.R
R/cmpndKernFunctions.R
R/disimKernFunctions.R
R/export.R
R/gammaPriorFunctions.R
R/gpdisimLinearFunctions.R
R/gpsimDatabase.R
R/gpsimLinearFunctions.R
R/invgammaPriorFunctions.R
R/kernFunctions.R
R/miscFunctions.R
R/mlpKernFunctions.R
R/optimiFunctions.R
R/priorFunctions.R
R/processData.R
R/rbfKernFunctions.R
R/simKernFunctions.R
R/translateKernFunctions.R
R/whiteKernFunctions.R
data/drosophila_gpsim_fragment.RData
data/drosophila_mmgmos_fragment.RData
demos/tp63.Rnw
inst/CITATION
inst/NEWS
man/ExpressionTimeSeries-class.Rd
man/GPLearn.Rd
man/GPModel-class.Rd
man/GPPlot.Rd
man/GPRankTargets.Rd
man/SCGoptim.Rd
man/drosophila_gpsim_fragment.Rd
man/drosophila_mmgmos_fragment.Rd
man/expTransform.Rd
man/export.Rd
man/generateModels.Rd
man/gpsimCreate.Rd
man/kernCompute.Rd
man/kernCreate.Rd
man/kernDiagGradX.Rd
man/kernGradient.Rd
man/lnDiffErfs.Rd
man/modelDisplay.Rd
man/modelExpandParam.Rd
man/modelExtractParam.Rd
man/modelGradient.Rd
man/modelTieParam.Rd
man/optimiDefaultConstraint.Rd
man/plotTimeseries.Rd
man/processData.Rd
man/scoreList-class.Rd
man/tigre-package.Rd
src/miscCFunctions.c
vignettes/gpsim.bib
vignettes/tigre.Rnw
