bmMLE: Brownian motion maximum likelihood estimation
In ajrominger/hiDrosophoBioGeo: Ecological and evolutionary biogeography of Hawaiian picture wing Drosophila
Description
Usage
Arguments
Details
Value
Description
Fits the parameters of a Brownian motion model to phylogenetic
and trait data
Usage
1
bmMLE(phy, x)
Arguments
phy
a phylogeny object of class phylo from package ape
x
a numeric vector of traits, length equal to number of tips in
phy; order of trait values is assumed (and not checked) to be same as
order of tips in phy
Details
stub
Value
a named list giving the MLE of the root trait (x0), BM
variance (s2), and variance-covariance matrix (Smat)
ajrominger/hiDrosophoBioGeo documentation built on Jan. 26, 2022, 6:06 a.m.
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Description Usage Arguments Details Value
Description
Fits the parameters of a Brownian motion model to phylogenetic and trait data
Usage
1 | bmMLE(phy, x)
|
Arguments
phy |
a phylogeny object of class |
x |
a numeric vector of traits, length equal to number of tips in
|
Details
stub
Value
a named list giving the MLE of the root trait (x0), BM
variance (s2), and variance-covariance matrix (Smat)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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