compute_links: Compute species links

In alaindanet/SizeTrophicInteractions: What the Package Does (One Line, Title Case)

Description

Compute feeding links between species based on their size

Usage

compute_links(
  size_class,
  th_prey_size,
  piscivory_index,
  fish_diet_shift,
  resource_diet_shift,
  species,
  fish,
  low_bound,
  upper_bound,
  fish_resource_method = "overlap",
  pred_win_method = "midpoint"
)

Arguments

size_class	a data.frame generated by compute_classes
th_prey_size	data.frame generated by compute_prey_size
piscivory_index	data.frame generated by compute_piscivory
fish_diet_shift	a data.frame containing species, life stage, lower and upper bound size for each stage
resource_diet_shift	data.frame generated by compute_prey_size
species	variable name
fish	name of logical piscivory variable. 0 = no piscivory; 1 = piscivory
low_bound	variable containing lower limit of the stage
upper_bound	variable containing upper limit of the stage. Not used.

Value

list containing the species-species and the species-resource interaction matrix

alaindanet/SizeTrophicInteractions documentation built on Dec. 18, 2021, 11:32 p.m.