biomart.gene.position: Fetches the chromosomal coordinates of the specified gene
In alesssia/timesaveR: Widely used function to save time on everyday work
View source: R/biomart_queries.R
biomart.gene.position R Documentation
Fetches the chromosomal coordinates of the specified gene
Description
Uses biomaRt function to fetch the chromosomal coordinates for the given
HUGO gene symbols. It uses the given BioMart database.
Usage
biomart.gene.position(gene, mart)
Arguments
gene
the variant mame (HUGO gene symbols)
mart
BioMart database
Value
genomic coordinates
Author(s)
Alessia Visconti
Examples
mybiomart <- biomart.fetch.GENE.grch37.mart()
biomart.gene.position("DDX11L1", mybiomart)
alesssia/timesaveR documentation built on Jan. 26, 2024, 5:21 p.m.
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View source: R/biomart_queries.R
| biomart.gene.position | R Documentation |
Fetches the chromosomal coordinates of the specified gene
Description
Uses biomaRt function to fetch the chromosomal coordinates for the given HUGO gene symbols. It uses the given BioMart database.
Usage
biomart.gene.position(gene, mart)
Arguments
gene |
the variant mame (HUGO gene symbols) |
mart |
BioMart database |
Value
genomic coordinates
Author(s)
Alessia Visconti
Examples
mybiomart <- biomart.fetch.GENE.grch37.mart()
biomart.gene.position("DDX11L1", mybiomart)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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