genus_gram_stain: Bacterial Genus Gram Stain Lookup Table
In alexbhatt/epidm: UK Epidemiological Data Management
genus_gram_stain R Documentation
Bacterial Genus Gram Stain Lookup Table
Description
A reference table of bacterial gram stain results by genus
to allow faster filtering of bacterial results.
This dataset has been maintained manually against the PHE SGSS database.
If there are organisms missing, please raise and issue or push request on the
epidm GitHub
Usage
genus_gram_stain
Format
A data frame with four columns
- organism_genus
The bacterial genus
- gram_stain
A character string to indicate POSITIVE or NEGATIVE type
- gram_positive
A 0/1 flag to indicate if the genus is gram positive
- gram_negative
A 0/1 flag to indicate if the genus is gram negative
alexbhatt/epidm documentation built on Aug. 21, 2024, 8:25 a.m.
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| genus_gram_stain | R Documentation |
Bacterial Genus Gram Stain Lookup Table
Description
A reference table of bacterial gram stain results by genus to allow faster filtering of bacterial results. This dataset has been maintained manually against the PHE SGSS database. If there are organisms missing, please raise and issue or push request on the epidm GitHub
Usage
genus_gram_stain
Format
A data frame with four columns
- organism_genus
The bacterial genus
- gram_stain
A character string to indicate POSITIVE or NEGATIVE type
- gram_positive
A 0/1 flag to indicate if the genus is gram positive
- gram_negative
A 0/1 flag to indicate if the genus is gram negative
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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