Files in alexjcornish/SANTA

Spatial Analysis of Network Associations

DESCRIPTION

NAMESPACE

NEWS

R/AsiGraph.R R/BinGraph.R R/CheckAttributes.R R/Compactness.R R/ComputeWeightsInBins.R R/CreateGrid.R R/DistGraph.R R/GraphDiffusion.R R/GraphMFPT.R R/Knet.R R/Knode.R R/Shuffle.R R/SpreadHits.R R/plot.Knet.R

data/datalist

data/edgelist.humannet.RData

data/edgelist.intact.RData

data/g.bandyopadhyay.treated.RData

data/g.bandyopadhyay.untreated.RData

data/g.costanzo.cor.RData

data/g.costanzo.raw.RData

data/g.srivas.high.RData

data/g.srivas.untreated.RData

data/go.entrez.RData

data/rnai.cheung.RData

inst/CITATION

inst/unitTests/test_AsiGraph.R inst/unitTests/test_BinGraph.R inst/unitTests/test_CheckAttributes.R inst/unitTests/test_Compactness.R inst/unitTests/test_ComputeWeightsInBins.R inst/unitTests/test_CreateGrid.R inst/unitTests/test_DistGraph.R inst/unitTests/test_GraphDiffusion.R inst/unitTests/test_GraphMFPT.R inst/unitTests/test_Knet.R inst/unitTests/test_Knode.R inst/unitTests/test_Shuffle.R inst/unitTests/test_SpreadHits.R man/BinGraph.Rd man/Compactness.Rd man/CreateGrid.Rd man/DistGraph.Rd man/GraphDiffusion.Rd man/GraphMFPT.Rd man/Knet.Rd man/Knode.Rd man/SANTA.data.Rd man/SpreadHits.Rd man/plot.Knet.Rd

src/computenetK_fewzeros.c

src/computenodeAUK.c

src/computeweights.c

tests/runTests.R vignettes/SANTA-vignette.Rmd

vignettes/fig_bionet_simulation.jpg

vignettes/fig_case_3_association.jpg

vignettes/fig_dna_1.jpg

vignettes/fig_dna_2.jpg

alexjcornish/SANTA documentation built on Aug. 7, 2021, 3:06 p.m.