adjust_Rcpp_min | Adjustment function |
adjust_R_Rcpp_short_binomial | Probabilites of sharing a given number of visits |
adjust_visits | Adjust the number of shared visits |
barcode | Unique pair identifier |
Bonferroni_m | Detecting the pairs using Bonferroni correction |
chooseC | Binomial coefficient |
find_pairs | Find significant pairs |
get_observed_pairs | Pairs with at least one shared visit |
getPairs | Pairs with shared visit on a certain date |
prepare_db | Prepare the database |
Shuffling_simulation | Shuffling simulation to determine shared visits... |
simulated_data | Simulated dataset of visit dates based on the SHCS |
svisits-package | svisits: finding HIV transmission and serosorting pairs using... |
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