WELL Water, Infants, and a Safe Environment: simulations

analysis_wrapper | User level function to run multiple simulation iterations |

convergence_check | Check stan model fit for convergence (not yet implemented) |

data_analyst | Fit a Stan/JAGS model in a single data set |

data_importer | bring in raw well data |

data_reader | Create data in form usable for Bayesian models |

get_model | Get an existing model from the wellwise package |

gibbs_basic | helper: make basic gibbs sampler code (incomplete) |

jags_basic | helper: make a basic jags model |

julia.model | Fit a julia gibbs sampler (given by s.code) |

make_fullrmod | helper: make a model to use in model.matrix |

mkdesignR | helper: Create code for a design matrix |

mkintervention | helper: create stan code that encodes an intervention in... |

mkinterventionR | helper: create R code that encodes an intervention in... |

mkints | helper: lorem ipsum |

mkmod | helper: create a model based on generic terms |

mkmodidx | helper: create a model based on generic terms, |

plot | Plot function for summarized results |

Print function for summarized simulation results | |

sink.reset | clean up problems with sinking where output doesn't show up |

sortstring | helper: Sort the words in a character string |

stan_basic | helper: make a basic stan model |

summary | Summarize results of multiple simulations |

summary.mcmc.list | Summary method for mcmc.list object from coda package |

trim | helper: Remove whitespace in a string |

trimints | helper: lorem ipsum |

welldata | Well water measurements |

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