Fit model

Aggregation | Aggregation parameter for negative binomial distribution |

analyse | Run full analysis for the 4 hypotheses and results of G-test |

bananaPlots | Plot function |

FitAdvancedAlphaBinomial | Fit the model "difference between subspecies, flexible hybrid... |

FitAdvancedAlphaNegbin | Fit the model "difference between subspecies, flexible hybrid... |

FitAdvancedAlphaStudent | Fit the model "difference between subspecies, flexible hybrid... |

FitAdvancedAlphaWeibull | Fit the model "difference between subspecies, flexible hybrid... |

FitAdvancedNoAlphaBinomial | Fit the model "difference between subspecies, no hybrid... |

FitAdvancedNoAlphaNegbin | Fit the model "difference between subspecies, no hybrid... |

FitAdvancedNoAlphaStudent | Fit the model "difference between subspecies, no hybrid... |

FitAdvancedNoAlphaWeibull | Fit the model "difference between subspecies, flexible hybrid... |

FitBasicAlphaBinomial | Fit the model "no difference between subspecies, flexible... |

FitBasicAlphaNegbin | Fit the model "no difference between subspecies, flexible... |

FitBasicAlphaStudent | Fit the model "no difference between subspecies, flexible... |

FitBasicAlphaWeibull | Fit the model "no difference between subspecies, flexible... |

FitBasicNoAlphaBinomial | Fit the model "no difference between subspecies, no hybrid... |

FitBasicNoAlphaNegbin | Fit the model "no difference between subspecies, no hybrid... |

FitBasicNoAlphaStudent | Fit the model "no difference between subspecies, no hybrid... |

FitBasicNoAlphaWeibull | Fit the model "no difference between subspecies, no hybrid... |

getBananaDF | Get bananaDF for a given model |

getParamBounds | Get our parameters at strat, lower, upper, for optimisation |

Gtest | Compare the hypotheses between each other : G-test. Test if... |

marshallData | Prepare our data for fitting by group |

MeanLoad | Function defining the expected load at one given point of the... |

printConvergence | Print if model converged or not |

runAll | Run full analysis for the 4 hypotheses |

runBinomial | Fit the four cases for binomial distribution of the expected... |

runNegbin | Fit the four cases for negative binomial distribution of the... |

runStudent | Fit the four cases for Student distribution of the expected... |

runWeibull | Fit the four cases for weibull distribution of the expected... |

SizeNegBin | Size parameter for negative binomial distribution |

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