run: Main function

Description Usage Arguments Details Value

View source: R/run.r

Description

Main function

Usage

1
run(datasetNameFile = NULL, methodNameFile = NULL, alpha = 0.05, perm = 2000)

Arguments

datasetNameFile

File with names of datasets for processing, one item per line, e.g. GSE1145

methodNameFile

File with names of methods for each dataset, one item per line, e.g. spiapcc

alpha

Alpha value for any method that considers alpha

perm

Number of permutations for any method that does bootstrap

Details

Place holder

Value

Returns nothing. Writes all results to files under working directory


allenaigit/spiapcc.demo documentation built on April 16, 2020, 11:53 a.m.