readZiessData: A funciton to handle loading in data from a Zies reading.

In allgenesconsidered/CardiacPeakFinder: RCaMP

Description

Designed to remove the empty "Marker" column, any empty rows after importing into R, and removing rows that do not contain mean intensity values

Usage

readZiessData(path_to_csv, time_index = 1, grep_keyword = "IntensityMean",
  time_units = "miliseconds")

Arguments

path_to_csv	A csv file containing data gathered from a Ziess experiment.
time_index	The index of the column containing all of the 'Time' data.
grep_keyword	The keyword passed to grep to fetch the colums for your particular experiment. By default, grep_keyword is set to 'IntensityMean', fetching columns containing mean intensity values.
time_units	A string. Should be set to "seconds" or "miliseconds". Default to miliseconds.

Value

A formated dataframe.

allgenesconsidered/CardiacPeakFinder documentation built on May 10, 2019, 9:23 a.m.