getFamilyIds: Get family IDs from native data set

In alondhe/MotherChildLinkage: Generates mother-child linkages in OMOP CDM v5.x databases in which pregnancy_episodes table is available.

Description

getFamilyIds obtains the family IDs from the native data source and writes to ff object.

Usage

getFamilyIds(nativeConnectionDetails, nativeDatabaseSchema, nativeTable,
  nativePersonId, nativeFamilyId, nativeStartDate, nativeEndDate)

Arguments

nativeConnectionDetails	An R object of type ConnectionDetails (details for the function that contains server info, database type, optionally username/password, port)
nativeDatabaseSchema	Fully qualified name of database schema that contains the native data set.
nativeTable	The name of the table that holds the family Id in the native data set.
nativePersonId	The name of the person_id field in the native data set.
nativeFamilyId	The name of the family_id field in the native data set.
nativeStartDate	The name of the start date field for the observation period / payer plan period
nativeEndDate	The name of the end date field for the observation period / payer plan period

Details

getFamilyIds obtains the family IDs from the native data source, which is useful if family IDs are time-varying and cannot be stored in the payer_plan_period.family_source_value field.

Value

ffdf object with the person - family Id linkage

alondhe/MotherChildLinkage documentation built on May 28, 2019, 4:55 p.m.