ganet.UniqNetSimp: Unifying a net list

In altayg/ganet: Global Assessment of NETwork Inference Algorithms Based on the Available Literature of Gene/Protein Interactions

Description

Unifies the same links in the given net list.

Usage

ganet.UniqNetSimp(netlist)

Arguments

netlist

Considers the first and second columns only.

Details

All the same interactions are unified.

Value

netlist

Unified netlist

Note

This package is intended to be updated with respect to feedbacks and also with updates of the current databases.

Author(s)

Gokmen Altay

References

1. G. Altay, N. Altay, D.E. Neal, Global assessment of network inference algorithms based on available literature of gene/protein interactions, Turk J Biol, 37:547-555, 2013. 2. G. Altay, J Zapardel, B Peters, "Determining preprocessing combinations and sample size for Gene Network Inference over ...", bioArxiv, 2017.

See Also

ganet.ComLinks, ganet.FEtest, ganet.combine

Examples

#data(ganet.ex.net)  # assume this is the predicted protein interactions

#ganet.ex.net <- ganet.UniqNetSimp(ganet.ex.net)  #unify the same links

altayg/ganet documentation built on May 11, 2019, 11:29 p.m.