NebulaSE-class: SummarizedExperiment with Nebula results
In amcdavid/GeneseeBulk: Pipeline, analysis functions and markdown templates for bulk RNAseq
NebulaSE-class R Documentation
SummarizedExperiment with Nebula results
Description
A subclass that provides no additional slots,
but exists to implement polymorphic behavior of tidy, results and resultsNames
Usage
## S3 method for class 'NebulaSE'
tidy(x, ...)
## S4 method for signature 'NebulaSE'
tidy(x, ...)
Arguments
x
output from run_nebula()
...
not used
Value
tibble with columns matching biobroom::tidy.DESeqResults()
Functions
-
tidy.NebulaSE: return tidy results
-
tidy,NebulaSE-method: S4 tidy
See Also
run_nebula()
amcdavid/GeneseeBulk documentation built on March 26, 2022, 4:58 a.m.
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| NebulaSE-class | R Documentation |
SummarizedExperiment with Nebula results
Description
A subclass that provides no additional slots,
but exists to implement polymorphic behavior of tidy, results and resultsNames
Usage
## S3 method for class 'NebulaSE' tidy(x, ...) ## S4 method for signature 'NebulaSE' tidy(x, ...)
Arguments
x |
output from |
... |
not used |
Value
tibble with columns matching biobroom::tidy.DESeqResults()
Functions
-
tidy.NebulaSE: return tidy results -
tidy,NebulaSE-method: S4 tidy
See Also
run_nebula()
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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