Man pages for aminadibi/epicR
R Package for Evaluation Platform in COPD
| calibrate_COPD_inc | Solves stochastically for COPD incidence rate equation. |
| calibrate_explicit_mortality | Calibrates explicit mortality |
| calibrate_explicit_mortality2 | Calibrates explicit mortality by Amin |
| calibrate_mi_incidence | Calibrates MI incidence. |
| calibrate_smoking | Calibrates smoking |
| Cget_agent_events | Returns all events of an agent. |
| Cget_all_events | Returns all events. |
| Cget_all_events_matrix | Returns a matrix containing all events |
| Cget_event | Returns the events stack. |
| Cget_events_by_type | Returns all events of a certain type. |
| Cget_inputs | Returns inputs |
| Cget_n_events | Returns total number of events. |
| Cget_output | Main outputs of the current run. |
| Cget_output_ex | Extra outputs from the model |
| Cget_runtime_stats | Returns run time stats. |
| Cget_settings | Returns current settings. |
| Cget_smith | Returns agent Smith. |
| Cset_input_var | Sets input variables. |
| Cset_settings_var | Sets model settings. |
| epicR | 'epicR' package |
| export_figures | Runs the model and exports an excel file with all output data |
| express_matrix | Express matrix. |
| get_agent_events | Returns events specific to an agent. |
| get_all_events | Returns all events. |
| get_default_settings | Exports default settings |
| get_errors | Returns errors |
| get_events_by_type | Returns certain events by type |
| get_input | Returns a list of default model input values |
| get_list_elements | Get list elements |
| get_sample_output | Returns a sample output for a given year and gender. |
| init_session | Initializes a model. Allocates memory to the C engine. |
| mvrnormArma | Samples from a multivariate normal |
| report_COPD_by_ctime | Reports COPD related stats. |
| report_exacerbation_by_time | Reports exacerbation-related stats. |
| resume | Resumes running of model. |
| run | Runs the model, after a session has been initialized. |
| sanity_check | Basic tests of model functionalty. Serious issues if the test... |
| sanity_COPD | Basic COPD test. |
| terminate_session | Terminates a session and releases allocated memory. |
| test_case_detection | Returns results of Case Detection strategies |
| validate_comorbidity | Returns results of validation tests for comorbidities |
| validate_COPD | Returns results of validation tests for COPD |
| validate_diagnosis | Returns results of validation tests for diagnosis |
| validate_exacerbation | Returns results of validation tests for exacerbation rates |
| validate_gpvisits | Returns results of validation tests for GP visits |
| validate_lung_function | Returns results of validation tests for lung function |
| validate_medication | Returns results of validation tests for medication module. |
| validate_mortality | Returns results of validation tests for mortality rate |
| validate_overdiagnosis | Returns results of validation tests for overdiagnosis |
| validate_payoffs | Returns results of validation tests for payoffs, costs and... |
| validate_population | Returns results of validation tests for population module |
| validate_smoking | Returns results of validation tests for smoking module. |
| validate_survival | Returns the Kaplan Meier curve comparing COPD and non-COPD |
| validate_symptoms | Returns results of validation tests for Symptoms |
| validate_treatment | Returns results of validation tests for Treatment |
