rarefy_mean | R Documentation |
rarefy_mean
rarefies a community matrix n
times and averages
the outcomes.
rarefy_mean( comm, sample = min(rowSums(comm)), n = 10, remove.singlets = TRUE, digits = FALSE )
comm |
Community matrix |
sample |
Sample size to rarefy to based on the minimum row sum from the community matrix |
n |
Number of iterations to run |
remove.singlets |
Boolean to determine whether to remove singletons |
digits |
Boolean to determine whether to include decimals |
matrix
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