OFP: Oligo Fishing Pipeline
In anabeloff/AODPvisual: AODP data visualisation

This script is designed to match (fish) oligo sequences in large pools of NGS output. There are two key terms used here in fishing:

* Hook - small oligo desinged by AODP, species specific. * Pond - NGS dataset, where hooks (oligos) used to fish matching sequrnces out.

1	dt <- ofp(matched_out = arg[1], NGSdata = arg[2], tab = arg[3], newick = arg[4])

`matched_out`	Prefix. It will be used in names of output files.
`NGSdata`	Path to 'pond', NGS data in multisequence FASTA format.
`tab`	AODP tab output file with oligos.
`newick`	AODP reference tree.

##---- Should be DIRECTLY executable !! ----
##-- ==>  Define data, use random,
##--	or do  help(data=index)  for the standard data sets.

## The function is currently defined as
function (x)
{
  }