Man pages for andrepazv/changeRangeR
| aggregateCells | Aggregate cells and connect cell IDs at different scales |
| aooArea | Calculate AOO |
| buildFuncDivTree | title |
| calc_PE | Calculate phylogenetic endemism |
| cellBySpeciesMatrices | Make cell by species (CBS) matrices split into a specified... |
| cellIDToRaster | Put sparse matrix values into raster |
| cellIndexTable | Create a table linking cell IDs with their longitude and... |
| cm.cols1 | Color palletes Useful contrasts for plotting |
| collapseCols | Collapse columns of a sparse matrix |
| collapseRows | Collapse rows of a sparse matrix |
| compareRichness | title |
| complementarity | Compare continuous raster values within and outside of a mask |
| convertSummaryBaseDir | Convert directory structure to work on different paths or... |
| dot-chopTasks | Split up jobs for parallelization |
| dot-speciesByCellLongFormat | Make dataframe of species ID and occupied cells |
| envChange | Calculate change in suitable SDM area through time |
| fdCBSfilterBySpByCell | cbs scenario filtering |
| fdMapPlot | title |
| filterCBS | title |
| futureOverlap | Calculate future overlap of SDMs with shapefile categories |
| getSpNamesFromDirs | title |
| hello | Hello, World! |
| makeUniqueCommunities | title |
| mapSpecies | Map a species based on cbs |
| maskCBSscenario | cbs scenario masking |
| mcp | Minimum Convex Hull Polygon |
| mcpSDM | SDM-based Minimum Convex Hull Polygon |
| metricFromCBS | title |
| phyloDiv | title |
| rangeArea | Calculate taxon range area |
| rangeAreaCategoricalRaster | Calculate range area intersecting a raster |
| ratioOverlap | Calculate the proportion of a range area that is either 1:... |
| richnessFromCBS | Calculate taxon richness |
| SE | Calculate species endemism |
| setupSummaryDirectories | Initialize a set of directories to store summary outputs |
| speciesAttributeByCell | title |
| speciesIndexTable | Create a table linking species names with their index in CBS... |
| spRangeChangeFromCBS | title |
| turnoverFromCBS | title |
