Edwards_nutrient_traits: Nutrient utilization traits of phytoplankton.

In andrewdolman/phytotraitr: An R data package for phytoplankton traits

Description

Data from Kyle F. Edwards, Christopher A. Klausmeier, and Elena Litchman (2015). Nutrient utilization traits of phytoplankton. Ecology 96:2311. http://dx.doi.org/10.1890/14-2252.1.

Usage

data(Edwards_nutrient_traits)

Format

A data frame with 384 rows and 42 variables:

Encoding UTF-8

Column name	Variable definition	Units	Storage type
species	Species name	text	string
isolate	Isolate ID	text	string
taxon	Taxon name	text	string
system	Freshwater/marine	text	string
temperature	Culture temperature	°C	floating point
irradiance	Culture irradiance	µmol photons m^-2^ s^-1^	floating point
light_hours	Culture daylength	hr	integer
synonym	Former species name	text	string
volume	Cell volume	µm^3^	floating point
c_per_cell	Carbon per cell	µmol cell^-1^	floating point
c_citation	C per cell citation	integer	integer
mu_inf_amm	µ~inf~ for ammonium-limited growth	day^-1^	floating point
mu_amm	µ~max~ for ammonium-limited growth	day^-1^	floating point
k_amm_m	K~m~ for ammonium-limited growth	µmol L^-1^	floating point
k_amm	K for ammonium uptake	µmol L^-1^	floating point
vmax_amm	V~max~ for ammonium uptake	µmol N cell^-1^ day^-1^	floating point
vmax_amm_c	V~max~:C for ammonium uptake	µmol N µmol C^-1^ day ^-1^	floating point
qmin_amm	Q~min~ for ammonium-limited growth	µmol N cell^-1^	floating point
qmin_amm_c	Q~min~:C for ammonium-limited growth	µmol N µmol C^-1^	floating point
qmax_amm	Q~max~ for ammonium-limited growth	µmol N cell^-1^	floating point
qmax_amm_c	Q~max~:C for ammonium-limited growth	µmol N µmol C^-1^	floating point
mu_inf_nit	µ~inf~ for nitrate-limited growth	day^-1^	floating point
mu_nit	µ~max~ for nitrate-limited growth	day^-1^	floating point
k_nit_m	K~m~ for nitrate-limited growth	µmol L^-1^	floating point
k_nit	K for nitrate uptake	µmol L^-1^	floating point
vmax_nit	V~max~ for nitrate uptake	µmol N cell^-1^ day^-1^	floating point
vmax_nit_c	V~max~:C for nitrate uptake	µmol N µmol C^-1^ day^-1^	floating point
qmin_nit	Q~min~ for nitrate-limited growth	µmol N cell^-1^	floating point
qmin_nit_c	Q~min~:C for nitrate-limited growth	µmol N µmol C^-1^	floating point
qmax_nit	Q~max~ for nitrate-limited growth	µmol N cell^-1^	floating point
qmax_nit_c	Q~max~:C for nitrate-limited growth	µmol N µmol C^-1^	floating point
mu_inf_p	µ~inf~ for phosphate-limited growth	day^-1^	floating point
mu_p	µmax for phosphate-limited growth	day^-1^	floating point
k_p_m	Km for phosphate-limited growth	µmol L^-1^	floating point
k_p	K for phosphate uptake	µmol L^-1^	floating point
vmax_p	V~max~ for phosphate uptake	µmol P cell^-1^ day^-1^	floating point
vmax_p_c	V~max~:C for phosphate uptake	µmol P µmol C^-1^ day^-1^	floating point
qmin_p	Q~min~ for phosphate-limited growth	µmol P cell^-1^	floating point
qmin_p_c	Q~min~:C for phosphate-limited growth	µmol P µmol C^-1^	floating point
qmax_p	Q~max~ for phosphate-limited growth	µmol P cell^-1^	floating point
qmax_p_c	Q~max~:C for phosphate-limited growth	µmol P µmol C^-1^	floating point
citation	Publication code	integer	integer

Details

Table 1 of Ecological Archives E096-202-D1.

Corrections

The value for "system" was corrected from "fresh" to "freshwater" for one entry

Source

http://www.esapubs.org/archive/ecol/E096/202/

andrewdolman/phytotraitr documentation built on May 10, 2019, 10:31 a.m.