Files in andrewhooker/MBAOD
Model Based Adaptive Optimal Design

.Rbuildignore
.Rbuildignore~
.gitignore
DESCRIPTION
LICENSE.md
MBAOD.Rproj
NAMESPACE
NEWS
R/change_seed_number.R R/cleanup.R R/combine_design_and_space.R R/combine_designs.R R/compareDesigns.R R/compute.auc.R R/copyModels.R R/createFunctionInput.R R/createPopedDB.R R/create_design_database.R R/evalDesign.R R/evalFixedDesign.R R/execute.R R/extract.ree.R R/extract_cohort_design.R R/first_non_null.R R/getOptimalCov.R R/getPars.R R/getPopedOfv.R R/makeSimFile.R R/makeSimFile_nonmem.R R/matrix_from_triangle.R R/mbaod_simulate.R R/mbaod_vpc.R R/merge_parameters.R R/multiplot.R R/optimize_next_cohort.R R/plot_model_prediction.R R/plot_parameter_estimates.R R/print_design.R R/print_xt.R R/readEstPar.R R/readNumPar.R R/readUpdateFimCOI.R R/runAdaptiveDesignStep.R R/runPoped_matlab.R R/runRepAna.R R/runSSE.R R/summarize_estimation.R R/summaryResults.R R/sumo.R R/update_design.R README.md
inst/docs/using_mbaod_pkg/.gitignore
inst/docs/using_mbaod_pkg/figures/2013_06_15_PODE_AOD_Hooker/Slide01.png
inst/docs/using_mbaod_pkg/figures/2013_06_15_PODE_AOD_Hooker/Slide02.png
inst/docs/using_mbaod_pkg/figures/2013_06_15_PODE_AOD_Hooker/Slide03.png
inst/docs/using_mbaod_pkg/figures/2013_06_15_PODE_AOD_Hooker/Slide04.png
inst/docs/using_mbaod_pkg/figures/2013_06_15_PODE_AOD_Hooker/Slide05.png
inst/docs/using_mbaod_pkg/figures/2013_06_15_PODE_AOD_Hooker/Slide06.png
inst/docs/using_mbaod_pkg/figures/2013_06_15_PODE_AOD_Hooker/Slide07.png
inst/docs/using_mbaod_pkg/figures/2013_06_15_PODE_AOD_Hooker/Slide08.png
inst/docs/using_mbaod_pkg/figures/2013_06_15_PODE_AOD_Hooker/Slide09.png
inst/docs/using_mbaod_pkg/figures/2013_06_15_PODE_AOD_Hooker/Slide10.png
inst/docs/using_mbaod_pkg/figures/2013_06_15_PODE_AOD_Hooker/Slide11.png
inst/docs/using_mbaod_pkg/figures/2013_06_15_PODE_AOD_Hooker/Slide12.png
inst/docs/using_mbaod_pkg/figures/2013_06_15_PODE_AOD_Hooker/Slide13.png
inst/docs/using_mbaod_pkg/figures/2013_06_15_PODE_AOD_Hooker/Slide14.png
inst/docs/using_mbaod_pkg/figures/2013_06_15_PODE_AOD_Hooker/Slide15.png
inst/docs/using_mbaod_pkg/figures/2013_06_15_PODE_AOD_Hooker/Slide16.png
inst/docs/using_mbaod_pkg/figures/2013_06_15_PODE_AOD_Hooker/Slide17.png
inst/docs/using_mbaod_pkg/figures/2013_06_15_PODE_AOD_Hooker/Slide18.png
inst/docs/using_mbaod_pkg/figures/2013_06_15_PODE_AOD_Hooker/Slide19.png
inst/docs/using_mbaod_pkg/figures/2013_06_15_PODE_AOD_Hooker/Slide20.png
inst/docs/using_mbaod_pkg/figures/2013_06_15_PODE_AOD_Hooker/Slide21.png
inst/docs/using_mbaod_pkg/figures/2013_06_15_PODE_AOD_Hooker/Slide22.png
inst/docs/using_mbaod_pkg/figures/2013_06_15_PODE_AOD_Hooker/Slide23.png
inst/docs/using_mbaod_pkg/figures/2013_06_15_PODE_AOD_Hooker/Slide24.png
inst/docs/using_mbaod_pkg/figures/2013_06_15_PODE_AOD_Hooker/Slide25.png
inst/docs/using_mbaod_pkg/figures/2013_06_15_PODE_AOD_Hooker/Slide26.png
inst/docs/using_mbaod_pkg/figures/2013_06_15_PODE_AOD_Hooker/Slide27.png
inst/docs/using_mbaod_pkg/figures/2013_06_15_PODE_AOD_Hooker/Slide28.png
inst/docs/using_mbaod_pkg/figures/2013_06_15_PODE_AOD_Hooker/Slide29.png
inst/docs/using_mbaod_pkg/figures/2013_06_15_PODE_AOD_Hooker/Slide30.png
inst/docs/using_mbaod_pkg/figures/2013_06_15_PODE_AOD_Hooker/Slide31.png
inst/docs/using_mbaod_pkg/figures/2013_06_15_PODE_AOD_Hooker/Slide32.png
inst/docs/using_mbaod_pkg/figures/2013_06_15_PODE_AOD_Hooker/Slide33.png
inst/docs/using_mbaod_pkg/figures/2013_06_15_PODE_AOD_Hooker/Slide34.png
inst/docs/using_mbaod_pkg/figures/2013_06_15_PODE_AOD_Hooker/Slide35.png
inst/docs/using_mbaod_pkg/figures/2013_06_15_PODE_AOD_Hooker/Slide36.png
inst/docs/using_mbaod_pkg/figures/2013_06_15_PODE_AOD_Hooker/Slide37.png
inst/docs/using_mbaod_pkg/figures/2013_06_15_PODE_AOD_Hooker/Slide38.png
inst/docs/using_mbaod_pkg/figures/2013_06_15_PODE_AOD_Hooker/Slide39.png
inst/docs/using_mbaod_pkg/figures/2013_06_15_PODE_AOD_Hooker/Slide40.png
inst/docs/using_mbaod_pkg/figures/2013_06_15_PODE_AOD_Hooker/Slide41.png
inst/docs/using_mbaod_pkg/figures/2013_06_15_PODE_AOD_Hooker/Slide42.png
inst/docs/using_mbaod_pkg/figures/2013_06_15_PODE_AOD_Hooker/Slide43.png
inst/docs/using_mbaod_pkg/figures/2013_06_15_PODE_AOD_Hooker/Slide44.png
inst/docs/using_mbaod_pkg/figures/2013_06_15_PODE_AOD_Hooker/Slide45.png
inst/docs/using_mbaod_pkg/figures/2013_06_15_PODE_AOD_Hooker/Slide46.png
inst/docs/using_mbaod_pkg/figures/2013_06_15_PODE_AOD_Hooker/Slide47.png
inst/docs/using_mbaod_pkg/figures/2013_06_15_PODE_AOD_Hooker/Slide48.png
inst/docs/using_mbaod_pkg/figures/2013_06_15_PODE_AOD_Hooker/Slide49.png
inst/docs/using_mbaod_pkg/figures/2013_06_15_PODE_AOD_Hooker/Slide50.png
inst/docs/using_mbaod_pkg/figures/2013_06_15_PODE_AOD_Hooker/Slide51.png
inst/docs/using_mbaod_pkg/figures/2013_06_15_PODE_AOD_Hooker/Slide52.png
inst/docs/using_mbaod_pkg/figures/2013_06_15_PODE_AOD_Hooker/Slide53.png
inst/docs/using_mbaod_pkg/figures/2013_06_15_PODE_AOD_Hooker/Slide54.png
inst/docs/using_mbaod_pkg/figures/2013_06_15_PODE_AOD_Hooker/Slide55.png
inst/docs/using_mbaod_pkg/figures/2013_06_15_PODE_AOD_Hooker/Slide56.png
inst/docs/using_mbaod_pkg/figures/2013_06_15_PODE_AOD_Hooker/Slide57.png
inst/docs/using_mbaod_pkg/figures/2013_06_15_PODE_AOD_Hooker/Slide58.png
inst/docs/using_mbaod_pkg/figures/2013_06_15_PODE_AOD_Hooker/Slide59.png
inst/docs/using_mbaod_pkg/figures/2013_06_15_PODE_AOD_Hooker/Slide60.png
inst/docs/using_mbaod_pkg/figures/Example_1_rep_100_optimized_designs.pdf
inst/docs/using_mbaod_pkg/figures/Example_1_rep_100_optimized_designs.png
inst/docs/using_mbaod_pkg/figures/Example_1_rep_100_vpc001.pdf inst/docs/using_mbaod_pkg/figures/Example_1_rep_100_vpc002.pdf inst/docs/using_mbaod_pkg/new_stuff.Rmd
inst/docs/using_mbaod_pkg/new_stuff.html
inst/docs/using_mbaod_pkg/using_mbaod_package copy.pdf inst/docs/using_mbaod_pkg/using_mbaod_package.Rmd
inst/docs/using_mbaod_pkg/using_mbaod_package.html
inst/docs/using_mbaod_pkg/using_mbaod_package.pdf
inst/examples/Ex_1_bridging/.gitignore
inst/examples/Ex_1_bridging/poped_matlab/.gitignore
inst/examples/Ex_1_bridging/poped_matlab/NONMEM_files/run1fE.mod
inst/examples/Ex_1_bridging/poped_matlab/NONMEM_files/run1fS.mod
inst/examples/Ex_1_bridging/poped_matlab/NONMEM_files/run1rE.mod
inst/examples/Ex_1_bridging/poped_matlab/NONMEM_files/run1rS.mod
inst/examples/Ex_1_bridging/poped_matlab/NONMEM_files/run2fE.mod
inst/examples/Ex_1_bridging/poped_matlab/NONMEM_files/run2fS.mod
inst/examples/Ex_1_bridging/poped_matlab/NONMEM_files/run2fSSE.mod
inst/examples/Ex_1_bridging/poped_matlab/NONMEM_files/run2rE.mod
inst/examples/Ex_1_bridging/poped_matlab/NONMEM_files/run2rS.mod
inst/examples/Ex_1_bridging/poped_matlab/NONMEM_files/run3rE.mod
inst/examples/Ex_1_bridging/poped_matlab/PopED_files/feps.m
inst/examples/Ex_1_bridging/poped_matlab/PopED_files/ff.m
inst/examples/Ex_1_bridging/poped_matlab/PopED_files/function_input_reduced.m
inst/examples/Ex_1_bridging/poped_matlab/PopED_files/sfg.m
inst/examples/Ex_1_bridging/poped_matlab/scripts/run.sh
inst/examples/Ex_1_bridging/poped_matlab/scripts/run_andy.sh
inst/examples/Ex_1_bridging/poped_matlab/scripts/runlo.sh
inst/examples/Ex_1_bridging/poped_matlab/test_mbaod.R
inst/examples/Ex_1_bridging/poped_r/.gitignore
inst/examples/Ex_1_bridging/poped_r/Example_1.R inst/examples/Ex_1_bridging/poped_r/Example_1_a.R inst/examples/Ex_1_bridging/poped_r/Example_1_b.R inst/examples/Ex_1_bridging/poped_r/Example_1_c.R inst/examples/Ex_1_bridging/poped_r/Example_1_d.R inst/examples/Ex_1_bridging/poped_r/Example_1_e.R inst/examples/Ex_1_bridging/poped_r/Example_1_f.R inst/examples/Ex_1_bridging/poped_r/Example_1_old.R
inst/examples/Ex_1_bridging/poped_r/NONMEM_files/est_full.mod
inst/examples/Ex_1_bridging/poped_r/NONMEM_files/est_red.mod
inst/examples/Ex_1_bridging/poped_r/NONMEM_files/run1fE.mod
inst/examples/Ex_1_bridging/poped_r/NONMEM_files/run1fS.mod
inst/examples/Ex_1_bridging/poped_r/NONMEM_files/run1rE.mod
inst/examples/Ex_1_bridging/poped_r/NONMEM_files/run1rS.mod
inst/examples/Ex_1_bridging/poped_r/NONMEM_files/run2fE.mod
inst/examples/Ex_1_bridging/poped_r/NONMEM_files/run2fS.mod
inst/examples/Ex_1_bridging/poped_r/NONMEM_files/run2fSSE.mod
inst/examples/Ex_1_bridging/poped_r/NONMEM_files/run2rE.mod
inst/examples/Ex_1_bridging/poped_r/NONMEM_files/run2rS.mod
inst/examples/Ex_1_bridging/poped_r/NONMEM_files/run3rE.mod
inst/examples/Ex_1_bridging/poped_r/NONMEM_files/sim.mod
inst/examples/Ex_1_bridging/poped_r/PopED_files/PopED_output_summary_D_cont_opt_1.txt
inst/examples/Ex_1_bridging/poped_r/PopED_files/PopED_output_summary_mfea_opt_1.txt
inst/examples/Ex_1_bridging/poped_r/PopED_files/poped.mod.PK.1.comp.maturation.R inst/examples/Ex_1_bridging/poped_r/PopED_files/poped.mod.PK.1.comp.maturation_test.R inst/examples/Ex_1_bridging/poped_r/make_plots.R inst/tools/sourceDir.R man/MBAOD-package.Rd tests/test-all.R tests/testthat/examples_fcn_doc/examples_create_design.R tests/testthat/examples_fcn_doc/examples_create_design_space.R tests/testthat/examples_fcn_doc/examples_first_non_null.R tests/testthat/examples_fcn_doc/examples_model_prediction.R
andrewhooker/MBAOD documentation built on June 3, 2017, 5:12 p.m.