andreyshabalin/simPRS: Fast Simulation of Polygenic Risk Scores

Simulation of Polygenic Risk Score calculations allows to (1) Select an optimal p-value threshold, (2) Perform power analyses, and (3) Estimate polygenicity of a phenotype. Simulations are performed without direct simulations of the genotype and phenotype data. Instead, genome-wide association study (GWAS) summary statistics are generated directly from their finite sample distributions.

Getting started

Package details

Maintainer
LicenseLGPL-3
Version0.9
URL https://github.com/andreyshabalin/simPRS https://andreyshabalin.shinyapps.io/simPRS/
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("andreyshabalin/simPRS")
andreyshabalin/simPRS documentation built on May 21, 2019, 2 p.m.