process_model_runs: Process model runs

In andybeet/hydramse: Performs MSE using Hydra

Description

Reads in all of the model run data, processes it, and writes to an .rds file. Details of the processing can be found in section below. Contents of rds file are tidy and used in plotting routines

Usage

process_model_runs(
  data,
  indices,
  scenarios,
  rootFolder,
  outputScenarioDirs,
  revenueData,
  outputType = "indices",
  nLastYrs
)

Arguments

data	List. The hydra dataList hydradata::hydraDataList
indices	Character vector. The names of the indices of interest from the model run.
scenarios	Character vector. The names of the scenario. Defined as a harvest control rul with a max exploitation rate
rootFolder	root folder holding all run info
outputScenarioDirs	list of scenario directories under the rootFolder
revenueData	Data frame (see process_single_scenario)
outputType	Character string. Name of folder where Hydra output files are stored ("indices","diagnostics")
nLastYrs	Numeric scalar. Number of trailing years in each run to take mean over. Default = 20 (Last 20 yrs of sim)

Value

Nothing. RDS files are produced

Processing details

A model run (scenario) is considered to be n simulations of the Hydra model. Stochasticity differentiates each simulation.

Each scenario/ model run is processed as in process_single_scenario. All of the processed scenarios and the relevant indices are then exported as an RDS file

andybeet/hydramse documentation built on April 16, 2021, 5:23 a.m.