extractModuleGO: Extract results from the module GO analysis

View source: R/moduleGO.R

extractModuleGOR Documentation

Extract results from the module GO analysis

Description

Turns the list of lists from the moduleGO function into a more comprehensible data frame. Note that if a GO term enrichment does not exist for that module, it is set as NA.

Usage

extractModuleGO(moduleGO_list, labels = NULL)

Arguments

moduleGO_list

The list of list of data frames for each module to be turned into a data frame.

labels

Optional, a list of module names. Optional; if not inputted, these will be extracted from the list of module GO enrichments.

Value

A data frame summarizing the GO term enrichments from each group, with columns on the ordered by the minimum p-value for OR term enrichment in any group.


andymckenzie/DGCA documentation built on Sept. 15, 2023, 5:04 a.m.