Man pages for angelesarzalluz/scfilters
A correlation-based method for quality filtering of single-cell RNAseq data
| all_calls | Run the method. |
| bin_scdata | Bin genes by mean expression. |
| calculate_cvs | Calculate coefficient of variation of genes. |
| compute_control | Generate a negative control. |
| compute_density | Calculate density of correlation. |
| compute_histogram | Compute a quality metric. |
| correlate | Calculate correlations against top window. |
| extract_top_genes | Select top highly expressed genes. |
| filter_data | Quality filtering of data. |
| plot_scatter | Plotting the results. |
| randomize_top | Randomize the top window. |
