annikacleven/regtreesegpackage: Segmenting CNV and BAF data using regression tree methods
An implementation of a regression tree approach to segment Copy Number Variant locations. The regression tree approach can use the optimal complexity parameter value, the optimal complexity parameter and 3 iterations of a regression tree, or the optimal parameter value, 3 iterations of a regression tree approach, and weighting the points farthest from zero. By entering a dataframe the functions allow the user to visualize segmentation in the whole genome and on a single chromosome level. They also return dataframes of information about the segmentation.
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Package details |
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| Maintainer | |
| License | `use_mit_license()`, `use_gpl3_license()` or friends to pick a license |
| Version | 0.0.0.9000 |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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